Some Java apps just don't want to play with Awesome wm.
Basically, recent Java vm is stuffed; presuming that re-parenting window manager is the norm.
Ref: openjdk bug report
Fix for Sun java - set this in the env before launching the app
export AWT_TOOLKIT=MToolkit
openjdk may have a different fix. See this Debian bug report
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For the benefit of other people coming here through Google, that is probably not the best fix in 2009. I updated the Awesome wiki with all the different fixes and the JVMs they apply to.
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